Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX470978: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-321191' containing sample 'M1439'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 923M bases, 420Mb downloads

UUID: d3bf265d-7280-4e5d-a94c-e0f4bfbe527f

Design: Illumina sequencing of Mycobacterium tuberculosis M1439 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235697 • SRP037901 • All experiments • All runs

Sample:

SAMN02599032 • SRS557808 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1439

Library:

Name: Pond-321191

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 478539.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ED8G

material_type: DNA:DNA Somatic

product_order: PDO-2811

product_part_number: P-MCV-0004

project: G57767

research_project: RP-114

root_sample_id: SM-4P56P

sample_id: SM-5ED8G

work_request: 39947

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 923M bases, 420Mb

Run	# of Spots	# of Bases	Size	Published
SRR1169489	2,290,634	462.7M	210.2Mb	2014-02-14
SRR1172335	2,278,445	460.2M	209.8Mb	2014-02-19

ID:: 651227

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